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It's just simple question, look at these pictures:

enter image description here

enter image description here

As you can see, I'm trying to using loop and slice, but edge is not connected.

I tried to fix this, but it didn't worked(removing doubles, recalculate normals, remove faces that has not connected and re-fill it or etc).

What causes this, and how do I solve this problem?

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Your mesh is non manifold at these spots. There are faces inside the volume which you have to delete.faceinside

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