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After looking for answers, I have set the resolution up to 100, changed the obstacle initialization to shell and added a Solidify modifier to the obstacle. See below

fluid obstacle

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    $\begingroup$ What is the fluid type of your pipe? You need to set it to "Obstacle" if you want the simulation to interact with it. $\endgroup$ – Billy S Sep 16 '17 at 0:57
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Concerning your pipe object, you just need to apply location, rotation and scale and it will work. Press Ctrl+A, choose location, repeat shortcuts to choose rotation and scale.

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